Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.85■□□□□ 0.13
TOP3BO95985 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.85■□□□□ 0.13
TOP3BO95985 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 AC099063.4-201ENST00000641099 1602 ntBASIC15.85■□□□□ 0.13
TOP3BO95985 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TOP3BO95985 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.84■□□□□ 0.13
TOP3BO95985 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 REXO1L1P-202ENST00000608646 1974 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TOP3BO95985 AC092506.1-202ENST00000401022 528 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.84■□□□□ 0.13
TOP3BO95985 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 GOLGA2P4-201ENST00000441462 777 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.84■□□□□ 0.13
TOP3BO95985 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 ZNF890P-202ENST00000530367 1156 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 WFDC1-204ENST00000613603 549 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 AL136982.4-201ENST00000437689 1740 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 CICP23-201ENST00000605013 2741 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 AC127383.1-201ENST00000444697 1800 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 AL691432.1-201ENST00000596308 1422 ntBASIC15.84■□□□□ 0.13
TOP3BO95985 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TOP3BO95985 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TOP3BO95985 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.84■□□□□ 0.13
TOP3BO95985 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.83■□□□□ 0.13
TOP3BO95985 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TOP3BO95985 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TOP3BO95985 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TOP3BO95985 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TOP3BO95985 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.83■□□□□ 0.13
TOP3BO95985 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TOP3BO95985 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TOP3BO95985 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms