Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.98□□□□□ -0.33
ABCA1O95477 AC144831.1-201ENST00000573312 2656 ntBASIC12.98□□□□□ -0.33
ABCA1O95477 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ABCA1O95477 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ABCA1O95477 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ABCA1O95477 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ABCA1O95477 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ABCA1O95477 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ABCA1O95477 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ABCA1O95477 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.98□□□□□ -0.33
ABCA1O95477 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ABCA1O95477 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ABCA1O95477 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ABCA1O95477 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.97□□□□□ -0.33
ABCA1O95477 AC091804.1-201ENST00000486888 567 ntBASIC12.97□□□□□ -0.33
ABCA1O95477 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.97□□□□□ -0.33
ABCA1O95477 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 AC138028.6-201ENST00000616106 1482 ntBASIC12.97□□□□□ -0.33
ABCA1O95477 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 AC024909.3-201ENST00000611513 2257 ntBASIC12.97□□□□□ -0.33
ABCA1O95477 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ABCA1O95477 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 AL121723.1-201ENST00000445194 1519 ntBASIC12.97□□□□□ -0.33
ABCA1O95477 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 C1QBPP1-201ENST00000400117 770 ntBASIC12.97□□□□□ -0.33
ABCA1O95477 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.97□□□□□ -0.33
ABCA1O95477 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.97□□□□□ -0.33
ABCA1O95477 SLED1-202ENST00000512051 380 ntBASIC12.97□□□□□ -0.33
ABCA1O95477 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.97□□□□□ -0.33
ABCA1O95477 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.97□□□□□ -0.33
ABCA1O95477 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ABCA1O95477 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.97□□□□□ -0.33
ABCA1O95477 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.96□□□□□ -0.33
ABCA1O95477 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
ABCA1O95477 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ABCA1O95477 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ABCA1O95477 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ABCA1O95477 MIR663B-201ENST00000408361 115 ntBASIC12.96□□□□□ -0.33
ABCA1O95477 MIR1202-201ENST00000408529 83 ntBASIC12.96□□□□□ -0.33
ABCA1O95477 CNN2P8-201ENST00000421872 913 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms