Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKL5O76039 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 REXO1L2P-201ENST00000425429 2069 ntBASIC17.91■□□□□ 0.46
CDKL5O76039 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 LINC01101-201ENST00000622953 1884 ntBASIC17.9■□□□□ 0.46
CDKL5O76039 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 DRD5P1-201ENST00000456605 1438 ntBASIC17.9■□□□□ 0.46
CDKL5O76039 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDKL5O76039 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDKL5O76039 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL5O76039 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL5O76039 GNAQP1-201ENST00000444815 1067 ntBASIC17.9■□□□□ 0.46
CDKL5O76039 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.9■□□□□ 0.46
CDKL5O76039 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL5O76039 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.9■□□□□ 0.46
CDKL5O76039 AC026410.3-201ENST00000514280 936 ntBASIC17.9■□□□□ 0.46
CDKL5O76039 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.9■□□□□ 0.46
CDKL5O76039 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL5O76039 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDKL5O76039 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL5O76039 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL5O76039 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.9■□□□□ 0.46
CDKL5O76039 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL5O76039 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CDKL5O76039 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL5O76039 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 SLC7A15P-201ENST00000424028 1363 ntBASIC17.9■□□□□ 0.46
CDKL5O76039 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL5O76039 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CDKL5O76039 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL5O76039 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CDKL5O76039 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 DFFBP1-201ENST00000433250 979 ntBASIC17.89■□□□□ 0.45
CDKL5O76039 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 SPTLC1P1-201ENST00000447199 261 ntBASIC17.89■□□□□ 0.45
CDKL5O76039 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 UGT1A2P-201ENST00000454886 866 ntBASIC17.89■□□□□ 0.45
CDKL5O76039 AC104596.2-201ENST00000512793 793 ntBASIC17.89■□□□□ 0.45
CDKL5O76039 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL5O76039 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.89■□□□□ 0.45
CDKL5O76039 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.89■□□□□ 0.45
CDKL5O76039 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.89■□□□□ 0.45
CDKL5O76039 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL5O76039 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL5O76039 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms