Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 AP000845.1-201ENST00000581677 2131 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ZIC3O60481 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
ZIC3O60481 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.8□□□□□ -0.2
ZIC3O60481 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 AC016694.1-201ENST00000434179 700 ntBASIC13.8□□□□□ -0.2
ZIC3O60481 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ZIC3O60481 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZIC3O60481 FTH1P14-201ENST00000482930 551 ntBASIC13.8□□□□□ -0.2
ZIC3O60481 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.8□□□□□ -0.2
ZIC3O60481 IGHV3-71-201ENST00000523324 359 ntBASIC13.8□□□□□ -0.2
ZIC3O60481 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ZIC3O60481 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.8□□□□□ -0.2
ZIC3O60481 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ZIC3O60481 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.8□□□□□ -0.2
ZIC3O60481 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZIC3O60481 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.8□□□□□ -0.2
ZIC3O60481 AC132938.4-201ENST00000623835 848 ntBASIC13.8□□□□□ -0.2
ZIC3O60481 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.8□□□□□ -0.2
ZIC3O60481 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
ZIC3O60481 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC3O60481 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC3O60481 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
ZIC3O60481 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
ZIC3O60481 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZIC3O60481 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZIC3O60481 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 BOLA2P3-201ENST00000404566 256 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC3O60481 AC022210.1-201ENST00000449856 793 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 AC022616.1-201ENST00000518688 554 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC3O60481 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms