Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMARCA5O60264 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 AL138799.1-201ENST00000448213 1675 ntBASIC18.98■□□□□ 0.63
SMARCA5O60264 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMARCA5O60264 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCA5O60264 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCA5O60264 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SMARCA5O60264 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCA5O60264 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCA5O60264 DGCR5-201ENST00000399539 862 ntBASIC18.97■□□□□ 0.63
SMARCA5O60264 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 AL353779.1-201ENST00000434793 351 ntBASIC18.97■□□□□ 0.63
SMARCA5O60264 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCA5O60264 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 AC120045.2-201ENST00000567334 178 ntBASIC18.97■□□□□ 0.63
SMARCA5O60264 AC124283.3-201ENST00000570869 594 ntBASIC18.97■□□□□ 0.63
SMARCA5O60264 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.97■□□□□ 0.63
SMARCA5O60264 SPDYE22P-201ENST00000582158 798 ntBASIC18.97■□□□□ 0.63
SMARCA5O60264 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 AL645728.2-202ENST00000641679 227 ntBASIC18.97■□□□□ 0.63
SMARCA5O60264 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCA5O60264 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 INTS4P2-202ENST00000614726 2019 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.96■□□□□ 0.63
SMARCA5O60264 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 WASH3P-207ENST00000560956 1394 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 AC007686.3-201ENST00000619017 3487 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SMARCA5O60264 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 PIN1P1-201ENST00000412108 996 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.96■□□□□ 0.63
SMARCA5O60264 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 TERF1P3-201ENST00000505638 1227 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.96■□□□□ 0.63
SMARCA5O60264 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCA5O60264 AC138761.1-201ENST00000584393 385 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCA5O60264 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.96■□□□□ 0.63
SMARCA5O60264 AC092364.2-202ENST00000597012 1073 ntBASIC18.96■□□□□ 0.63
SMARCA5O60264 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMARCA5O60264 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMARCA5O60264 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCA5O60264 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMARCA5O60264 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms