Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.73■□□□□ 0.91
CHD2O14647 ETV2-207ENST00000619399 994 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD2O14647 AC023090.2-201ENST00000625182 2110 ntBASIC20.73■□□□□ 0.91
CHD2O14647 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD2O14647 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD2O14647 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD2O14647 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD2O14647 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHD2O14647 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD2O14647 HCG27-204ENST00000424675 895 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD2O14647 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD2O14647 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD2O14647 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
CHD2O14647 DBP-202ENST00000593500 712 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD2O14647 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD2O14647 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD2O14647 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHD2O14647 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD2O14647 PCDHA12-202ENST00000613593 2588 ntBASIC20.72■□□□□ 0.91
CHD2O14647 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.72■□□□□ 0.91
CHD2O14647 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD2O14647 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD2O14647 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHD2O14647 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD2O14647 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.71■□□□□ 0.91
CHD2O14647 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC20.71■□□□□ 0.91
CHD2O14647 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CHD2O14647 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.71■□□□□ 0.91
CHD2O14647 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD2O14647 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHD2O14647 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 LTB4R2-202ENST00000528054 3092 ntBASIC20.71■□□□□ 0.91
CHD2O14647 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.71■□□□□ 0.91
CHD2O14647 AC012508.2-201ENST00000567613 1472 ntBASIC20.71■□□□□ 0.91
CHD2O14647 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHD2O14647 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 AC024293.1-201ENST00000467930 498 ntBASIC20.71■□□□□ 0.91
CHD2O14647 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CHD2O14647 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD2O14647 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD2O14647 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD2O14647 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHD2O14647 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHD2O14647 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20.7■□□□□ 0.9
CHD2O14647 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
CHD2O14647 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.7■□□□□ 0.9
CHD2O14647 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.7■□□□□ 0.9
CHD2O14647 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD2O14647 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD2O14647 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD2O14647 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD2O14647 MIR2392-201ENST00000584881 84 ntBASIC20.7■□□□□ 0.9
CHD2O14647 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CHD2O14647 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHD2O14647 CICP11-201ENST00000434745 2827 ntBASIC20.7■□□□□ 0.9
CHD2O14647 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHD2O14647 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD2O14647 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms