Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
UPK1AO00322 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.62□□□□□ -0.07
UPK1AO00322 AC106028.4-201ENST00000614509 607 ntBASIC14.62□□□□□ -0.07
UPK1AO00322 AL390754.1-201ENST00000619088 582 ntBASIC14.62□□□□□ -0.07
UPK1AO00322 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 AC027601.5-201ENST00000624065 2482 ntBASIC14.62□□□□□ -0.07
UPK1AO00322 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
UPK1AO00322 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 HSPA7-201ENST00000445535 1927 ntBASIC14.62□□□□□ -0.07
UPK1AO00322 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1AO00322 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
UPK1AO00322 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1AO00322 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1AO00322 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1AO00322 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 AC136759.1-202ENST00000530858 2194 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 AC097359.2-201ENST00000604992 2389 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms