Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 AKR7A2P1-201ENST00000460134 915 ntBASIC17.76■□□□□ 0.43
USP17L11C9JVI0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP17L11C9JVI0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 AL645728.2-202ENST00000641679 227 ntBASIC17.75■□□□□ 0.43
USP17L11C9JVI0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP17L11C9JVI0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 MIR663B-201ENST00000408361 115 ntBASIC17.74■□□□□ 0.43
USP17L11C9JVI0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 FAM8A4P-201ENST00000435433 1213 ntBASIC17.74■□□□□ 0.43
USP17L11C9JVI0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 AC091804.1-201ENST00000486888 567 ntBASIC17.74■□□□□ 0.43
USP17L11C9JVI0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 AC138028.6-201ENST00000616106 1482 ntBASIC17.74■□□□□ 0.43
USP17L11C9JVI0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP17L11C9JVI0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms