Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC140479.7-201ENST00000636301 2332 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 MIR661-201ENST00000384842 89 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 TERF1P3-201ENST00000505638 1227 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 DOC2GP-202ENST00000514950 1163 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC092337.1-201ENST00000568699 1129 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 SRD5A3P1-201ENST00000603021 949 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC004233.3-201ENST00000607794 1269 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC008761.3-201ENST00000624803 892 ntBASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRAMEF25A6NGN4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PRAMEF25A6NGN4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 AC015922.1-201ENST00000421102 1152 ntBASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PRAMEF25A6NGN4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms