Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AC025181.2-201ENST00000606994 802 ntBASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AHCYP2-201ENST00000430630 1300 ntBASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 AL645937.2-201ENST00000396808 931 ntBASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 FAM197Y7-201ENST00000432892 766 ntBASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 AC103810.3-201ENST00000583567 96 ntBASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 AC138951.2-201ENST00000623455 1161 ntBASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 PRSS30P-206ENST00000641773 873 ntBASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 AC023824.1-201ENST00000562945 2975 ntBASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CSNK1G3Q9Y6M4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AC078819.1-201ENST00000547454 765 ntBASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AC012085.1-201ENST00000548270 765 ntBASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 RN7SL48P-201ENST00000579283 293 ntBASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AC009542.2-202ENST00000619004 1067 ntBASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 GPR182-203ENST00000622922 591 ntBASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms