Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC084781.1-201ENST00000613737 656 ntBASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 AC013726.1-201ENST00000563747 2285 ntBASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 DKFZP434H168-201ENST00000567381 1905 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 AP005117.1-202ENST00000581724 1908 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 AL583805.1-201ENST00000391389 531 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 DUTP3-201ENST00000450025 415 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 POU5F1P2-201ENST00000521750 823 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 PGAM1P5-201ENST00000548011 764 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 RNF165-205ENST00000588679 2904 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 AL627231.1-201ENST00000394467 1125 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 FTH1P22-201ENST00000456305 520 ntBASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC22.6■■□□□ 1.21
CDC42BPBQ9Y5S2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 AC112693.3-201ENST00000624819 1983 ntBASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 ORAOV1P1-201ENST00000503108 395 ntBASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 TMBIM7P-202ENST00000641474 1516 ntBASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPBQ9Y5S2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 AC025271.4-201ENST00000621477 1726 ntBASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 AC092850.2-201ENST00000623821 2697 ntBASIC22.58■■□□□ 1.21
CDC42BPBQ9Y5S2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 LINC02199-201ENST00000506655 2702 ntBASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPBQ9Y5S2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms