Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC067930.6-201ENST00000623257 4947 ntBASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 AC025181.2-201ENST00000606994 802 ntBASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 NORAD-201ENST00000565493 5339 ntBASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL4A3BPQ9Y5P4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 C1QBPP1-201ENST00000400117 770 ntBASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 SOCS2P1-201ENST00000417727 557 ntBASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 AC091951.1-201ENST00000512854 2465 ntBASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 AP002414.2-201ENST00000591780 3365 ntBASIC17.22■□□□□ 0.35
COL4A3BPQ9Y5P4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 GPR53P-205ENST00000457298 1084 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms