Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 STRCP1-201ENST00000509801 5328 ntBASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 AP002414.3-201ENST00000589352 1468 ntBASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 SPTSSB-204ENST00000617024 1292 ntBASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP3Q9Y2W7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 CRYGEP-201ENST00000412192 528 ntBASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AC140658.5-201ENST00000438532 169 ntBASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 VN2R19P-201ENST00000442399 1052 ntBASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AC061975.2-201ENST00000581722 295 ntBASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TP73-AS1-207ENST00000624167 988 ntBASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP3Q9Y2W7 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms