Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 FAM58DP-201ENST00000428076 619 ntBASIC13.81□□□□□ -0.2
COPS3Q9UNS2 AL353705.2-201ENST00000428243 662 ntBASIC13.81□□□□□ -0.2
COPS3Q9UNS2 HTR5BP-201ENST00000430851 1154 ntBASIC13.81□□□□□ -0.2
COPS3Q9UNS2 TARDBPP1-201ENST00000442013 1203 ntBASIC13.81□□□□□ -0.2
COPS3Q9UNS2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ALG1L8P-201ENST00000533887 760 ntBASIC13.81□□□□□ -0.2
COPS3Q9UNS2 AC055717.3-201ENST00000622967 595 ntBASIC13.81□□□□□ -0.2
COPS3Q9UNS2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COPS3Q9UNS2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 FAM8A3P-201ENST00000427218 844 ntBASIC13.8□□□□□ -0.2
COPS3Q9UNS2 MKNK2P1-201ENST00000437526 628 ntBASIC13.8□□□□□ -0.2
COPS3Q9UNS2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 AP000845.1-201ENST00000581677 2131 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms