Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC132938.4-201ENST00000623835 848 ntBASIC16.23■□□□□ 0.19
CDH9Q9ULB4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH9Q9ULB4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 AC012508.2-201ENST00000567613 1472 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 CNN2P8-201ENST00000421872 913 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 AC022616.1-201ENST00000518688 554 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 MIR4259-201ENST00000584466 101 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 MIR6752-201ENST00000618442 71 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 AL603764.1-201ENST00000636452 321 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.22■□□□□ 0.19
CDH9Q9ULB4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH9Q9ULB4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 AL360270.3-201ENST00000609118 1348 ntBASIC16.21■□□□□ 0.19
CDH9Q9ULB4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 HLA-K-203ENST00000430151 1046 ntBASIC16.21■□□□□ 0.19
CDH9Q9ULB4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 AC105917.1-201ENST00000506637 2539 ntBASIC16.21■□□□□ 0.19
CDH9Q9ULB4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH9Q9ULB4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH9Q9ULB4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH9Q9ULB4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms