Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 CROCCP4-201ENST00000457096 498 ntBASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SNX29P1-201ENST00000548357 1007 ntBASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 RPSAP52-203ENST00000622976 1023 ntBASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 AC126365.1-201ENST00000578585 1514 ntBASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 C8orf49-201ENST00000525043 1968 ntBASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 RPL7P3-201ENST00000441388 714 ntBASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AC093813.1-201ENST00000605066 256 ntBASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TUBB1P2-201ENST00000422712 1306 ntBASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TUBB1P1-201ENST00000503144 1300 ntBASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FOXD3Q9UJU5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.77□□□□□ -0.2
FOXD3Q9UJU5 AC138035.3-201ENST00000622706 2791 ntBASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms