Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AL118558.3-201ENST00000607414 1079 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC244093.1-201ENST00000610837 814 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC138466.3-201ENST00000619983 221 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC018735.1-201ENST00000437208 1502 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 AC012508.2-201ENST00000567613 1472 ntBASIC17.25■□□□□ 0.35
COL20A1Q9P218 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 MTX1P1-201ENST00000440904 838 ntBASIC17.25■□□□□ 0.35
COL20A1Q9P218 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 RN7SL713P-201ENST00000582127 302 ntBASIC17.25■□□□□ 0.35
COL20A1Q9P218 PPY2P-201ENST00000582808 702 ntBASIC17.25■□□□□ 0.35
COL20A1Q9P218 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 AL603764.1-201ENST00000636452 321 ntBASIC17.25■□□□□ 0.35
COL20A1Q9P218 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 AC015818.8-201ENST00000587907 1519 ntBASIC17.25■□□□□ 0.35
COL20A1Q9P218 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL20A1Q9P218 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL20A1Q9P218 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 MIR1247-201ENST00000408206 136 ntBASIC17.24■□□□□ 0.35
COL20A1Q9P218 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 BTBD6P1-201ENST00000412176 1267 ntBASIC17.24■□□□□ 0.35
COL20A1Q9P218 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 AC104306.2-201ENST00000451877 341 ntBASIC17.24■□□□□ 0.35
COL20A1Q9P218 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 MESTP3-201ENST00000503460 968 ntBASIC17.24■□□□□ 0.35
COL20A1Q9P218 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 AC243960.2-201ENST00000600996 747 ntBASIC17.24■□□□□ 0.35
COL20A1Q9P218 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms