Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC092552.1-201ENST00000547243 906 ntBASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC092364.2-202ENST00000597012 1073 ntBASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMC4Q9NTJ3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 ELK1P1-201ENST00000485699 580 ntBASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 AC120045.2-201ENST00000567334 178 ntBASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 AL138799.1-201ENST00000448213 1675 ntBASIC19.75■□□□□ 0.75
SMC4Q9NTJ3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 ZBED1P1-201ENST00000502364 1930 ntBASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AC134915.1-201ENST00000426461 574 ntBASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AL359711.2-201ENST00000563105 872 ntBASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AC140912.1-201ENST00000577171 1054 ntBASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMC4Q9NTJ3 AC012508.2-201ENST00000567613 1472 ntBASIC19.73■□□□□ 0.75
SMC4Q9NTJ3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMC4Q9NTJ3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.73■□□□□ 0.75
SMC4Q9NTJ3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms