Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTA1Q9NP79 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTA1Q9NP79 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.08■□□□□ 0.33
VTA1Q9NP79 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VTA1Q9NP79 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTA1Q9NP79 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AP000593.2-201ENST00000542775 1433 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AL662890.1-201ENST00000396818 632 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC016700.1-201ENST00000429424 312 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 NKAIN1P1-201ENST00000435754 582 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 EIF4HP1-201ENST00000453115 687 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC026434.2-201ENST00000506094 1078 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC044849.1-201ENST00000519737 1188 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC005730.2-201ENST00000564549 1184 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 AC105250.1-201ENST00000509378 2057 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 AL513523.2-202ENST00000427283 2040 ntBASIC17.08■□□□□ 0.32
VTA1Q9NP79 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.08■□□□□ 0.32
VTA1Q9NP79 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTA1Q9NP79 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 FKBP4P6-201ENST00000457486 1332 ntBASIC17.07■□□□□ 0.32
VTA1Q9NP79 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 RNA5SP423-201ENST00000517127 109 ntBASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AL023803.2-201ENST00000620080 638 ntBASIC17.07■□□□□ 0.32
VTA1Q9NP79 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTA1Q9NP79 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.07■□□□□ 0.32
VTA1Q9NP79 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 MIR3619-201ENST00000579667 83 ntBASIC17.06■□□□□ 0.32
VTA1Q9NP79 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTA1Q9NP79 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.06■□□□□ 0.32
VTA1Q9NP79 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms