Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SP110Q9HB58 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SP110Q9HB58 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SP110Q9HB58 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
SP110Q9HB58 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.81■□□□□ 0.12
SP110Q9HB58 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 AC098850.1-201ENST00000419919 790 ntBASIC15.81■□□□□ 0.12
SP110Q9HB58 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.81■□□□□ 0.12
SP110Q9HB58 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.81■□□□□ 0.12
SP110Q9HB58 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.81■□□□□ 0.12
SP110Q9HB58 WASH4P-201ENST00000564273 1246 ntBASIC15.81■□□□□ 0.12
SP110Q9HB58 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.81■□□□□ 0.12
SP110Q9HB58 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SP110Q9HB58 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.81■□□□□ 0.12
SP110Q9HB58 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 AC023024.2-201ENST00000623561 1993 ntBASIC15.81■□□□□ 0.12
SP110Q9HB58 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SP110Q9HB58 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SP110Q9HB58 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SP110Q9HB58 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.8■□□□□ 0.12
SP110Q9HB58 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SP110Q9HB58 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.8■□□□□ 0.12
SP110Q9HB58 AC134915.1-201ENST00000426461 574 ntBASIC15.8■□□□□ 0.12
SP110Q9HB58 AL442647.2-201ENST00000429864 857 ntBASIC15.8■□□□□ 0.12
SP110Q9HB58 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.8■□□□□ 0.12
SP110Q9HB58 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.8■□□□□ 0.12
SP110Q9HB58 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.8■□□□□ 0.12
SP110Q9HB58 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.8■□□□□ 0.12
SP110Q9HB58 AC107373.2-201ENST00000607735 490 ntBASIC15.8■□□□□ 0.12
SP110Q9HB58 AL662799.1-202ENST00000614205 422 ntBASIC15.8■□□□□ 0.12
SP110Q9HB58 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.8■□□□□ 0.12
SP110Q9HB58 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP110Q9HB58 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
SP110Q9HB58 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.8■□□□□ 0.12
SP110Q9HB58 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SP110Q9HB58 DRD5P1-201ENST00000456605 1438 ntBASIC15.79■□□□□ 0.12
SP110Q9HB58 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.79■□□□□ 0.12
SP110Q9HB58 AC092552.1-201ENST00000547243 906 ntBASIC15.79■□□□□ 0.12
SP110Q9HB58 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 TP53TG3HP-202ENST00000569755 579 ntBASIC15.79■□□□□ 0.12
SP110Q9HB58 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.79■□□□□ 0.12
SP110Q9HB58 AC027307.3-201ENST00000594262 1100 ntBASIC15.79■□□□□ 0.12
SP110Q9HB58 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.79■□□□□ 0.12
SP110Q9HB58 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.79■□□□□ 0.12
SP110Q9HB58 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.79■□□□□ 0.12
SP110Q9HB58 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SP110Q9HB58 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SP110Q9HB58 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP110Q9HB58 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms