Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AC022144.1-201ENST00000602255 1580 ntBASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AC104457.1-201ENST00000401024 814 ntBASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 MEIS3P1-201ENST00000495167 958 ntBASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AC093512.1-201ENST00000617969 520 ntBASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 FGD5P1-202ENST00000614866 2498 ntBASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC012508.2-201ENST00000567613 1472 ntBASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC004890.2-204ENST00000481968 304 ntBASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC135586.1-201ENST00000539323 574 ntBASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AL158212.4-201ENST00000624062 1286 ntBASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AC106881.1-201ENST00000605849 3329 ntBASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC40Q9H9A6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms