Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
PIF1Q9H611 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.83□□□□□ -0.04
PIF1Q9H611 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.83□□□□□ -0.04
PIF1Q9H611 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PIF1Q9H611 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PIF1Q9H611 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 AL607033.1-201ENST00000623900 1599 ntBASIC14.83□□□□□ -0.04
PIF1Q9H611 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.83□□□□□ -0.04
PIF1Q9H611 TFAMP1-201ENST00000412727 736 ntBASIC14.83□□□□□ -0.04
PIF1Q9H611 AL671277.1-201ENST00000429656 993 ntBASIC14.83□□□□□ -0.04
PIF1Q9H611 ACTG1P14-201ENST00000446382 1122 ntBASIC14.83□□□□□ -0.04
PIF1Q9H611 DNAJB3-201ENST00000446806 729 ntBASIC14.83□□□□□ -0.04
PIF1Q9H611 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.83□□□□□ -0.04
PIF1Q9H611 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.83□□□□□ -0.04
PIF1Q9H611 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.83□□□□□ -0.04
PIF1Q9H611 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.83□□□□□ -0.04
PIF1Q9H611 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.83□□□□□ -0.04
PIF1Q9H611 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 AC097359.3-201ENST00000603982 1210 ntBASIC14.83□□□□□ -0.04
PIF1Q9H611 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.83□□□□□ -0.04
PIF1Q9H611 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.83□□□□□ -0.04
PIF1Q9H611 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.83□□□□□ -0.04
PIF1Q9H611 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.83□□□□□ -0.04
PIF1Q9H611 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PIF1Q9H611 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.82□□□□□ -0.04
PIF1Q9H611 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 AC142381.1-201ENST00000426099 345 ntBASIC14.82□□□□□ -0.04
PIF1Q9H611 MKNK2P1-201ENST00000437526 628 ntBASIC14.82□□□□□ -0.04
PIF1Q9H611 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 AL139010.1-201ENST00000454878 894 ntBASIC14.82□□□□□ -0.04
PIF1Q9H611 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.82□□□□□ -0.04
PIF1Q9H611 HNRNPUP1-201ENST00000554987 333 ntBASIC14.82□□□□□ -0.04
PIF1Q9H611 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 AC008267.7-201ENST00000624570 1194 ntBASIC14.82□□□□□ -0.04
PIF1Q9H611 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.82□□□□□ -0.04
PIF1Q9H611 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PIF1Q9H611 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.82□□□□□ -0.04
PIF1Q9H611 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIF1Q9H611 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.81□□□□□ -0.04
PIF1Q9H611 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.81□□□□□ -0.04
PIF1Q9H611 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.81□□□□□ -0.04
PIF1Q9H611 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PIF1Q9H611 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 POLD2P1-201ENST00000511220 997 ntBASIC14.81□□□□□ -0.04
PIF1Q9H611 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.81□□□□□ -0.04
PIF1Q9H611 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.81□□□□□ -0.04
PIF1Q9H611 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.81□□□□□ -0.04
PIF1Q9H611 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms