Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 AC134915.1-201ENST00000426461 574 ntBASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 API5-211ENST00000534695 560 ntTSL 5 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 AC124283.3-201ENST00000570869 594 ntBASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 AL132655.2-201ENST00000596276 594 ntBASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 CHCHD2P3-201ENST00000603038 451 ntBASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 TMEM261P1-201ENST00000604899 340 ntBASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSER1Q9C0I3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AL157414.3-201ENST00000624276 1954 ntBASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC236430.1-201ENST00000402231 743 ntBASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC087499.6-201ENST00000411576 835 ntBASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 NUS1P3-201ENST00000423502 862 ntBASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC123567.1-201ENST00000548294 1261 ntBASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 AP002414.2-201ENST00000591780 3365 ntBASIC17.19■□□□□ 0.34
CCSER1Q9C0I3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC007541.1-201ENST00000570282 1469 ntBASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC004233.3-201ENST00000607794 1269 ntBASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 AC007431.3-201ENST00000623221 587 ntBASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 KRT8P22-201ENST00000562317 1415 ntBASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms