Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 HLA-C-210ENST00000640219 976 ntBASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP4Q9C0A0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP4Q9C0A0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
CNTNAP4Q9C0A0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP4Q9C0A0 AC136759.1-202ENST00000530858 2194 ntBASIC19.02■□□□□ 0.63
CNTNAP4Q9C0A0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP4Q9C0A0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC026803.1-201ENST00000569130 274 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 MIR3677-201ENST00000578964 60 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC103810.10-201ENST00000606504 343 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC006449.5-201ENST00000610658 2098 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 AC012508.2-201ENST00000567613 1472 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 FAM90A2P-201ENST00000511144 1395 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 FAM90A25P-201ENST00000528404 1395 ntBASIC19.01■□□□□ 0.63
CNTNAP4Q9C0A0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AL109837.1-201ENST00000603272 613 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC242376.2-201ENST00000619355 883 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC074138.1-201ENST00000611182 1303 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 CICP11-201ENST00000434745 2827 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC003102.2-201ENST00000589195 1469 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms