Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 AC097359.2-201ENST00000604992 2389 ntBASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 AC004832.2-201ENST00000426397 482 ntBASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 CEND1P1-201ENST00000451006 455 ntBASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 AC105339.1-204ENST00000636249 355 ntBASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 CICP4-201ENST00000447359 2812 ntBASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ST20-AS1-201ENST00000560255 4223 ntBASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AC018529.2-202ENST00000611482 3087 ntBASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AC074338.1-201ENST00000416825 156 ntBASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 MKNK2P1-201ENST00000437526 628 ntBASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 MTND6P24-201ENST00000440466 518 ntBASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 AL133215.2-201ENST00000609242 977 ntBASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms