Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.77□□□□□ -0.53
VGLL1Q99990 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 AC126335.2-201ENST00000623362 4637 ntBASIC11.76□□□□□ -0.53
VGLL1Q99990 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.76□□□□□ -0.53
VGLL1Q99990 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.76□□□□□ -0.53
VGLL1Q99990 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.76□□□□□ -0.53
VGLL1Q99990 KRT8P23-201ENST00000560090 1207 ntBASIC11.76□□□□□ -0.53
VGLL1Q99990 AC106730.1-201ENST00000566722 1090 ntBASIC11.76□□□□□ -0.53
VGLL1Q99990 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
VGLL1Q99990 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VGLL1Q99990 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 PTENP1-202ENST00000532280 3996 ntBASIC11.76□□□□□ -0.53
VGLL1Q99990 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VGLL1Q99990 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.76□□□□□ -0.53
VGLL1Q99990 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms