Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 DPY19L2P5-201ENST00000456300 331 ntBASIC19.82■□□□□ 0.76
ABCA3Q99758 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.82■□□□□ 0.76
ABCA3Q99758 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 AC138701.2-201ENST00000553634 226 ntBASIC19.82■□□□□ 0.76
ABCA3Q99758 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ABCA3Q99758 AC002044.2-201ENST00000624910 970 ntBASIC19.82■□□□□ 0.76
ABCA3Q99758 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA3Q99758 CASP16P-204ENST00000635032 809 ntBASIC19.82■□□□□ 0.76
ABCA3Q99758 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 AHCYP4-201ENST00000419201 1315 ntBASIC19.82■□□□□ 0.76
ABCA3Q99758 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCA3Q99758 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ABCA3Q99758 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ABCA3Q99758 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCA3Q99758 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCA3Q99758 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCA3Q99758 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ABCA3Q99758 GUSBP10-201ENST00000417412 665 ntBASIC19.81■□□□□ 0.76
ABCA3Q99758 BCAS2P2-201ENST00000425064 674 ntBASIC19.81■□□□□ 0.76
ABCA3Q99758 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 MIR2392-201ENST00000584881 84 ntBASIC19.81■□□□□ 0.76
ABCA3Q99758 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCA3Q99758 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ABCA3Q99758 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCA3Q99758 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 AC012508.2-201ENST00000567613 1472 ntBASIC19.81■□□□□ 0.76
ABCA3Q99758 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ABCA3Q99758 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA3Q99758 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCA3Q99758 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.8■□□□□ 0.76
ABCA3Q99758 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCA3Q99758 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.8■□□□□ 0.76
ABCA3Q99758 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.8■□□□□ 0.76
ABCA3Q99758 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ABCA3Q99758 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCA3Q99758 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCA3Q99758 AC009560.1-201ENST00000620208 434 ntBASIC19.8■□□□□ 0.76
ABCA3Q99758 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCA3Q99758 AC013726.1-201ENST00000563747 2285 ntBASIC19.8■□□□□ 0.76
ABCA3Q99758 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA3Q99758 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AC093909.3-201ENST00000504783 336 ntBASIC19.79■□□□□ 0.76
ABCA3Q99758 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
ABCA3Q99758 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 DBP-202ENST00000593500 712 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AC027601.3-201ENST00000622907 509 ntBASIC19.79■□□□□ 0.76
ABCA3Q99758 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.79■□□□□ 0.76
ABCA3Q99758 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCA3Q99758 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCA3Q99758 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCA3Q99758 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ABCA3Q99758 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA3Q99758 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.79■□□□□ 0.76
ABCA3Q99758 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.79■□□□□ 0.76
ABCA3Q99758 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC19.79■□□□□ 0.76
ABCA3Q99758 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.79■□□□□ 0.76
ABCA3Q99758 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms