Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 IGLV3-15-201ENST00000518356 244 ntBASIC15.64■□□□□ 0.09
PHOX2BQ99453 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 CNN2P10-201ENST00000443067 918 ntBASIC15.63■□□□□ 0.09
PHOX2BQ99453 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 AC019193.1-201ENST00000506678 823 ntBASIC15.63■□□□□ 0.09
PHOX2BQ99453 AC106794.1-201ENST00000506935 792 ntBASIC15.63■□□□□ 0.09
PHOX2BQ99453 RNA5SP486-201ENST00000515961 83 ntBASIC15.63■□□□□ 0.09
PHOX2BQ99453 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 PPY2P-201ENST00000582808 702 ntBASIC15.63■□□□□ 0.09
PHOX2BQ99453 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHOX2BQ99453 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.63■□□□□ 0.09
PHOX2BQ99453 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 AC007950.2-201ENST00000615045 2347 ntBASIC15.62■□□□□ 0.09
PHOX2BQ99453 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 SNX33P1-201ENST00000592116 1762 ntBASIC15.62■□□□□ 0.09
PHOX2BQ99453 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 YY1P1-201ENST00000427625 668 ntBASIC15.62■□□□□ 0.09
PHOX2BQ99453 AC078991.1-201ENST00000437297 610 ntBASIC15.62■□□□□ 0.09
PHOX2BQ99453 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHOX2BQ99453 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.62■□□□□ 0.09
PHOX2BQ99453 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms