Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 RN7SL769P-201ENST00000469386 295 ntBASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AP001505.2-201ENST00000616815 443 ntBASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AC015967.2-201ENST00000624092 234 ntBASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AC006435.4-201ENST00000625037 234 ntBASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 AL356737.1-201ENST00000634391 234 ntBASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 KRT8P19-201ENST00000551916 1455 ntBASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC3BQ96PB8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 GHSR-202ENST00000427970 912 ntBASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AC021723.1-201ENST00000486306 515 ntBASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AL162426.1-201ENST00000624141 743 ntBASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 AC026691.1-201ENST00000602502 2017 ntBASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3BQ96PB8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AC005740.2-201ENST00000511085 419 ntBASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms