Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 PTP4A1P2-201ENST00000546033 454 ntBASIC15.87■□□□□ 0.13
RPRD1AQ96P16 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPRD1AQ96P16 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 CICP6-201ENST00000457191 2729 ntBASIC15.86■□□□□ 0.13
RPRD1AQ96P16 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SAMD11P1-201ENST00000571429 661 ntBASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AC008735.3-201ENST00000596646 500 ntBASIC15.86■□□□□ 0.13
RPRD1AQ96P16 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RPRD1AQ96P16 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.85■□□□□ 0.13
RPRD1AQ96P16 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms