Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC087386.2-201ENST00000623212 4637 ntBASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC015802.1-201ENST00000588104 1449 ntBASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC108751.1-201ENST00000490852 363 ntBASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AP001005.1-201ENST00000571755 1248 ntBASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 AC073439.1-201ENST00000624121 1774 ntBASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CHMP6Q96FZ7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 CICP11-201ENST00000434745 2827 ntBASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 RPL5P21-201ENST00000404620 815 ntBASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 AC098831.1-202ENST00000438821 336 ntBASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 AC011467.4-201ENST00000594891 528 ntBASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP6Q96FZ7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 COL6A4P2-202ENST00000504443 2753 ntBASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms