Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 AC098850.1-201ENST00000419919 790 ntBASIC18.35■□□□□ 0.53
DDX11Q96FC9 TTTY23B-201ENST00000442790 549 ntBASIC18.35■□□□□ 0.53
DDX11Q96FC9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 RRP7BP-205ENST00000566851 833 ntBASIC18.35■□□□□ 0.53
DDX11Q96FC9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX11Q96FC9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX11Q96FC9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC104596.2-201ENST00000512793 793 ntBASIC18.34■□□□□ 0.53
DDX11Q96FC9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 KRT17P8-201ENST00000540749 863 ntBASIC18.34■□□□□ 0.53
DDX11Q96FC9 RAB43P1-201ENST00000561790 589 ntBASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DDX11Q96FC9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX11Q96FC9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX11Q96FC9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX11Q96FC9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms