Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 TOMM22P5-201ENST00000416399 439 ntBASIC16.31■□□□□ 0.2
ATP2A3Q93084 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 RPL13AP25-201ENST00000484130 612 ntBASIC16.31■□□□□ 0.2
ATP2A3Q93084 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AP005482.1-201ENST00000563722 1273 ntBASIC16.31■□□□□ 0.2
ATP2A3Q93084 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AL450472.2-201ENST00000603663 1156 ntBASIC16.31■□□□□ 0.2
ATP2A3Q93084 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 BRI3BPP1-201ENST00000594224 787 ntBASIC16.3■□□□□ 0.2
ATP2A3Q93084 BTNL10-201ENST00000595971 695 ntBASIC16.3■□□□□ 0.2
ATP2A3Q93084 CU634019.7-201ENST00000624153 1185 ntBASIC16.3■□□□□ 0.2
ATP2A3Q93084 FP236241.2-201ENST00000624906 1185 ntBASIC16.3■□□□□ 0.2
ATP2A3Q93084 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2A3Q93084 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2A3Q93084 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 REXO1L1P-202ENST00000608646 1974 ntBASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC134407.2-201ENST00000625089 1978 ntBASIC16.29■□□□□ 0.2
ATP2A3Q93084 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.29■□□□□ 0.2
ATP2A3Q93084 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 AC133552.6-201ENST00000613406 534 ntBASIC16.29■□□□□ 0.2
ATP2A3Q93084 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.29■□□□□ 0.2
ATP2A3Q93084 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATP2A3Q93084 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2A3Q93084 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP2A3Q93084 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms