Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.27□□□□□ -0.13
HPS1Q92902 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.27□□□□□ -0.13
HPS1Q92902 AC068137.2-201ENST00000605408 478 ntBASIC14.27□□□□□ -0.13
HPS1Q92902 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.27□□□□□ -0.13
HPS1Q92902 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HPS1Q92902 AC008267.7-201ENST00000624570 1194 ntBASIC14.27□□□□□ -0.13
HPS1Q92902 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.27□□□□□ -0.13
HPS1Q92902 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HPS1Q92902 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HPS1Q92902 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.27□□□□□ -0.13
HPS1Q92902 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HPS1Q92902 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.27□□□□□ -0.13
HPS1Q92902 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HPS1Q92902 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.27□□□□□ -0.13
HPS1Q92902 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.27□□□□□ -0.13
HPS1Q92902 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HPS1Q92902 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.26□□□□□ -0.13
HPS1Q92902 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HPS1Q92902 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HPS1Q92902 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HPS1Q92902 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.26□□□□□ -0.13
HPS1Q92902 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC14.26□□□□□ -0.13
HPS1Q92902 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.26□□□□□ -0.13
HPS1Q92902 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.26□□□□□ -0.13
HPS1Q92902 RFPL4AP1-201ENST00000530883 850 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 AL031432.2-201ENST00000566714 459 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 AL928711.1-201ENST00000570165 459 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 AP001542.1-201ENST00000591314 200 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HPS1Q92902 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 AC107308.1-201ENST00000615897 301 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 REXO1L3P-201ENST00000622202 1288 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 AL645728.2-201ENST00000641974 660 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.26□□□□□ -0.13
HPS1Q92902 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 AC148477.4-201ENST00000613430 1793 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HPS1Q92902 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.26□□□□□ -0.13
HPS1Q92902 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 AC136759.1-202ENST00000530858 2194 ntBASIC14.26□□□□□ -0.13
HPS1Q92902 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HPS1Q92902 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HPS1Q92902 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HPS1Q92902 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HPS1Q92902 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.25□□□□□ -0.13
HPS1Q92902 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HPS1Q92902 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HPS1Q92902 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HPS1Q92902 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HPS1Q92902 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms