Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.99□□□□□ -0.33
GCN1Q92616 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC12.99□□□□□ -0.33
GCN1Q92616 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 AC009113.1-201ENST00000570267 2443 ntBASIC12.99□□□□□ -0.33
GCN1Q92616 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.99□□□□□ -0.33
GCN1Q92616 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 KRT18P4-201ENST00000422599 1288 ntBASIC12.99□□□□□ -0.33
GCN1Q92616 AC004910.1-201ENST00000433493 787 ntBASIC12.99□□□□□ -0.33
GCN1Q92616 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.99□□□□□ -0.33
GCN1Q92616 RPL18AP8-201ENST00000486071 528 ntBASIC12.99□□□□□ -0.33
GCN1Q92616 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.99□□□□□ -0.33
GCN1Q92616 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 AC138696.2-201ENST00000607376 223 ntBASIC12.99□□□□□ -0.33
GCN1Q92616 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
GCN1Q92616 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCN1Q92616 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.98□□□□□ -0.33
GCN1Q92616 ABALON-201ENST00000629058 1903 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 RN7SL33P-201ENST00000462543 342 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 FAM86JP-202ENST00000484500 988 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.98□□□□□ -0.33
GCN1Q92616 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC12.98□□□□□ -0.33
GCN1Q92616 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.98□□□□□ -0.33
GCN1Q92616 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.98□□□□□ -0.33
GCN1Q92616 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 PYY2-201ENST00000315776 282 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 SOD1-202ENST00000389995 865 ntTSL 3 BASIC12.98□□□□□ -0.33
GCN1Q92616 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.98□□□□□ -0.33
GCN1Q92616 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC12.98□□□□□ -0.33
GCN1Q92616 RNF7-205ENST00000480908 782 ntTSL 4 BASIC12.98□□□□□ -0.33
GCN1Q92616 DUX4L47-201ENST00000566374 394 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 AC008825.2-201ENST00000603374 718 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 BX322534.1-201ENST00000635574 241 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 AC215524.1-201ENST00000635696 241 ntBASIC12.98□□□□□ -0.33
GCN1Q92616 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.98□□□□□ -0.33
GCN1Q92616 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.98□□□□□ -0.33
GCN1Q92616 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.98□□□□□ -0.33
GCN1Q92616 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GCN1Q92616 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCN1Q92616 FUCA1P1-201ENST00000374476 1351 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms