Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 DUSP5P1-201ENST00000441325 1139 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 FAM185BP-201ENST00000443595 716 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 SCARNA2-201ENST00000458748 420 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.64□□□□□ -0.23
AP3S1Q92572 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.64□□□□□ -0.23
AP3S1Q92572 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 AC024267.1-201ENST00000582320 895 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.64□□□□□ -0.23
AP3S1Q92572 ACTL9-202ENST00000612068 1252 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S1Q92572 AC089987.1-201ENST00000551654 2209 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP3S1Q92572 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S1Q92572 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
AP3S1Q92572 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3S1Q92572 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
AP3S1Q92572 GHSR-202ENST00000427970 912 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3S1Q92572 PRYP6-201ENST00000514804 343 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3S1Q92572 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3S1Q92572 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S1Q92572 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.63□□□□□ -0.23
AP3S1Q92572 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.63□□□□□ -0.23
AP3S1Q92572 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S1Q92572 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3S1Q92572 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S1Q92572 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
AP3S1Q92572 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 AC055811.4-201ENST00000624039 1754 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 AC005332.1-201ENST00000577698 1310 ntBASIC13.63□□□□□ -0.23
AP3S1Q92572 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S1Q92572 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S1Q92572 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 AC138969.3-201ENST00000546612 1459 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 AC138932.2-201ENST00000548268 1459 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 AC126755.4-201ENST00000549796 1459 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AP3S1Q92572 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
AP3S1Q92572 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms