Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 SOCS2P1-201ENST00000417727 557 ntBASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AP001889.1-201ENST00000525414 633 ntBASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AC079328.1-201ENST00000560358 952 ntBASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 DUX4L45-201ENST00000566406 1057 ntBASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AL118558.3-201ENST00000607414 1079 ntBASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 GHSR-202ENST00000427970 912 ntBASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 SAMD11P1-201ENST00000571429 661 ntBASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 AC093813.1-201ENST00000605066 256 ntBASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NKX2-3Q8TAU0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-3Q8TAU0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms