Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 AL627230.2-201ENST00000613254 655 ntBASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC009090.5-201ENST00000624886 2285 ntBASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AL035414.1-201ENST00000451327 857 ntBASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC026470.1-201ENST00000478038 846 ntBASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC003686.1-201ENST00000550956 1034 ntBASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC068867.1-201ENST00000559855 150 ntBASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AL596087.1-201ENST00000400979 1969 ntBASIC19.85■□□□□ 0.77
COL22A1Q8NFW1 AC025183.3-201ENST00000623526 1482 ntBASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 RN7SL665P-201ENST00000578793 300 ntBASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AL139339.2-201ENST00000608063 657 ntBASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 MIR645-201ENST00000385283 94 ntBASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 AC010976.2-201ENST00000609697 852 ntBASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL22A1Q8NFW1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.83■□□□□ 0.77
COL22A1Q8NFW1 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms