Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 AC005840.4-201ENST00000541242 2494 ntBASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 KRT8P37-201ENST00000451609 1420 ntBASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 KRT8P48-201ENST00000515599 1220 ntBASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 KRT18P58-201ENST00000527480 1120 ntBASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DNAAF1Q8NEP3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.65□□□□□ -0.23
DNAAF1Q8NEP3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CYP4F24P-201ENST00000586049 1580 ntBASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PHKG1P2-201ENST00000457537 863 ntBASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 MTDHP5-201ENST00000598980 586 ntBASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 AL121894.2-201ENST00000602977 491 ntBASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 AC055717.3-201ENST00000622967 595 ntBASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CICP11-201ENST00000434745 2827 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms