Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 AC103702.1-201ENST00000548801 2630 ntBASIC20.2■□□□□ 0.82
NGEFQ8N5V2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 MIR6805-201ENST00000615055 62 ntBASIC20.2■□□□□ 0.82
NGEFQ8N5V2 AL603764.1-201ENST00000636452 321 ntBASIC20.2■□□□□ 0.82
NGEFQ8N5V2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 AC144831.1-201ENST00000573312 2656 ntBASIC20.2■□□□□ 0.82
NGEFQ8N5V2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.2■□□□□ 0.82
NGEFQ8N5V2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AC134915.1-201ENST00000426461 574 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 RPS2P32-201ENST00000439199 892 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 VDAC1P7-201ENST00000462417 847 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AC120045.2-201ENST00000567334 178 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AC106886.1-201ENST00000568660 600 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 AC133539.2-201ENST00000604757 467 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 MIR6775-201ENST00000617557 69 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 TNRC18P2-201ENST00000417666 2714 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 INTS4P2-202ENST00000614726 2019 ntBASIC20.19■□□□□ 0.82
NGEFQ8N5V2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGEFQ8N5V2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms