Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.82■□□□□ 0.12
SIX5Q8N196 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SIX5Q8N196 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX5Q8N196 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX5Q8N196 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.81■□□□□ 0.12
SIX5Q8N196 KLF2P2-201ENST00000416807 1039 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 RPL17P11-201ENST00000417593 544 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.81■□□□□ 0.12
SIX5Q8N196 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX5Q8N196 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.81■□□□□ 0.12
SIX5Q8N196 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 SERPINA13P-202ENST00000478994 924 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX5Q8N196 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.81■□□□□ 0.12
SIX5Q8N196 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 MIR3907-201ENST00000579424 151 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.81■□□□□ 0.12
SIX5Q8N196 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 AC244157.2-201ENST00000616239 1006 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 AC091544.8-201ENST00000619490 361 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX5Q8N196 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 AC126755.1-201ENST00000525846 6405 ntBASIC15.81■□□□□ 0.12
SIX5Q8N196 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.81■□□□□ 0.12
SIX5Q8N196 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX5Q8N196 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SIX5Q8N196 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SIX5Q8N196 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 RNU1-114P-201ENST00000365297 166 ntBASIC15.8■□□□□ 0.12
SIX5Q8N196 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.8■□□□□ 0.12
SIX5Q8N196 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.8■□□□□ 0.12
SIX5Q8N196 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.8■□□□□ 0.12
SIX5Q8N196 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 AC079336.7-201ENST00000623428 1078 ntBASIC15.8■□□□□ 0.12
SIX5Q8N196 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.8■□□□□ 0.12
SIX5Q8N196 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.8■□□□□ 0.12
SIX5Q8N196 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SIX5Q8N196 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX5Q8N196 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIX5Q8N196 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms