Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00346Q8IVM7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 AC015922.1-201ENST00000421102 1152 ntBASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 AJ011931.1-201ENST00000618749 2492 ntBASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 ZBED1P1-201ENST00000502364 1930 ntBASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 AL136379.1-201ENST00000623471 2642 ntBASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00346Q8IVM7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 RPL13P2-201ENST00000440687 659 ntBASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 AP001160.2-201ENST00000596071 487 ntBASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 AC074044.1-201ENST00000609673 707 ntBASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LINC00346Q8IVM7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms