Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CROCCP3Q8IVE0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 ACE3P-201ENST00000423435 1973 ntBASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 BX005266.1-201ENST00000473402 457 ntBASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AC063952.2-201ENST00000498792 1227 ntBASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AC091076.1-201ENST00000610741 619 ntBASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AC006011.2-201ENST00000621313 1158 ntBASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AL139288.1-201ENST00000623748 933 ntBASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.04□□□□□ -0.16
CROCCP3Q8IVE0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 PTCHD3P3-201ENST00000403073 906 ntBASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms