Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 HCG11-201ENST00000411553 5696 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 RN7SKP230-201ENST00000365642 335 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 Z69890.1-201ENST00000382990 339 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AL627422.1-201ENST00000434104 580 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AL139008.1-201ENST00000437894 228 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 LYPLA2P1-203ENST00000447689 696 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 ALG1L6P-201ENST00000515248 758 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 TMCO5B-205ENST00000530020 894 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AC105137.3-201ENST00000617588 984 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 AC025262.2-201ENST00000623975 1056 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 FRMPD2B-201ENST00000431305 1347 ntBASIC18.96■□□□□ 0.63
COL23A1Q86Y22 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL23A1Q86Y22 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AC006058.4-201ENST00000624016 1670 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AL583805.1-201ENST00000391389 531 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AP000358.1-201ENST00000456260 156 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AC026410.1-201ENST00000507366 1101 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 RN7SL596P-201ENST00000582123 288 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 SIGLEC18P-201ENST00000602271 909 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AC008825.2-201ENST00000603374 718 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 LINC01783-202ENST00000614408 828 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 BX284668.2-205ENST00000619677 828 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AC073911.3-201ENST00000624401 631 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 AC015909.3-201ENST00000572855 1794 ntBASIC18.95■□□□□ 0.62
COL23A1Q86Y22 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL23A1Q86Y22 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL23A1Q86Y22 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms