Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC100756.1-201ENST00000562736 682 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AC138749.3-201ENST00000567691 622 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AC036164.1-201ENST00000570544 333 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 SAMD11P1-201ENST00000571429 661 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AC239800.4-201ENST00000603712 296 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AC116165.1-201ENST00000611806 668 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AL662799.1-202ENST00000614205 422 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AL035252.4-201ENST00000624174 288 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 CICP23-201ENST00000605013 2741 ntBASIC13.98□□□□□ -0.17
ATG4DQ86TL0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.98□□□□□ -0.17
ATG4DQ86TL0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AC067930.6-201ENST00000623257 4947 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 LINC02228-204ENST00000642115 2962 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 FGD5P1-202ENST00000614866 2498 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 PIN1P1-201ENST00000412108 996 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 FAM86LP-201ENST00000478302 853 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 SPDYE22P-201ENST00000582158 798 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AL132655.2-201ENST00000596276 594 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AC007541.1-201ENST00000570282 1469 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 AC099063.4-201ENST00000641099 1602 ntBASIC13.97□□□□□ -0.17
ATG4DQ86TL0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATG4DQ86TL0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 SPDYE19P-201ENST00000338590 713 ntBASIC13.96□□□□□ -0.17
ATG4DQ86TL0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ATG4DQ86TL0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms