Protein–RNA interactions for Protein: Q7L5N7

LPCAT2, Lysophosphatidylcholine acyltransferase 2, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2Q7L5N7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 MIR648-201ENST00000385046 94 ntBASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 AC007551.1-201ENST00000457394 519 ntBASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 AC068587.10-201ENST00000641210 219 ntBASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
LPCAT2Q7L5N7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 C1QBPP1-201ENST00000400117 770 ntBASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 YBX1P6-201ENST00000442962 1002 ntBASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AP000812.2-201ENST00000538934 718 ntBASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC079316.1-201ENST00000548397 411 ntBASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC244093.1-201ENST00000610837 814 ntBASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AC022532.1-201ENST00000624563 1728 ntBASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LPCAT2Q7L5N7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 BAATP1-201ENST00000412284 1225 ntBASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT2Q7L5N7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms