Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 AL139400.1-201ENST00000366220 510 ntBASIC14.34□□□□□ -0.11
TUBA1AQ71U36 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 AC093028.1-201ENST00000622998 982 ntBASIC14.34□□□□□ -0.11
TUBA1AQ71U36 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 FOXO1B-201ENST00000504678 1527 ntBASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1AQ71U36 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1AQ71U36 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AC142381.1-201ENST00000426099 345 ntBASIC14.33□□□□□ -0.12
TUBA1AQ71U36 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AC093724.1-201ENST00000448659 1027 ntBASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AC109322.1-201ENST00000524499 1264 ntBASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 KRT8P23-201ENST00000560090 1207 ntBASIC14.33□□□□□ -0.12
TUBA1AQ71U36 AC004449.1-201ENST00000564240 433 ntBASIC14.33□□□□□ -0.12
TUBA1AQ71U36 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1AQ71U36 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms