Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 YRDCP1-201ENST00000621419 643 ntBASIC19.06■□□□□ 0.64
RC3H1Q5TC82 HLA-C-210ENST00000640219 976 ntBASIC19.06■□□□□ 0.64
RC3H1Q5TC82 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 AC092127.1-201ENST00000567093 3455 ntBASIC19.05■□□□□ 0.64
RC3H1Q5TC82 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RC3H1Q5TC82 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 KRT8P21-201ENST00000430398 1491 ntBASIC19.04■□□□□ 0.64
RC3H1Q5TC82 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC130709.1-201ENST00000484779 1212 ntBASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC005962.1-201ENST00000584100 773 ntBASIC19.04■□□□□ 0.64
RC3H1Q5TC82 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 AC138894.2-201ENST00000602838 371 ntBASIC19.04■□□□□ 0.64
RC3H1Q5TC82 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RC3H1Q5TC82 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.04■□□□□ 0.64
RC3H1Q5TC82 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 AL662844.4-201ENST00000606367 2838 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 AC099398.1-201ENST00000567919 2776 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms