Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 TOMM22P5-201ENST00000416399 439 ntBASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 KLF2P4-201ENST00000451959 1225 ntBASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 AL359258.3-201ENST00000622910 2331 ntBASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC144BQ3MJ40 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CCDC144BQ3MJ40 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 MIR4525-201ENST00000580000 75 ntBASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 MIR4538-201ENST00000581377 78 ntBASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 AL022328.1-201ENST00000610050 478 ntBASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC144BQ3MJ40 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 BCRP2-202ENST00000447763 634 ntBASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 BCRP6-201ENST00000510112 632 ntBASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 BCRP7-201ENST00000511549 544 ntBASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms