Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 AL162727.3-201ENST00000635661 2787 ntBASIC18.83■□□□□ 0.61
DDR1Q08345 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDR1Q08345 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
DDR1Q08345 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.83■□□□□ 0.6
DDR1Q08345 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
DDR1Q08345 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.83■□□□□ 0.6
DDR1Q08345 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.83■□□□□ 0.6
DDR1Q08345 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.83■□□□□ 0.6
DDR1Q08345 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.83■□□□□ 0.6
DDR1Q08345 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
DDR1Q08345 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 AC009084.3-201ENST00000623356 437 ntBASIC18.83■□□□□ 0.6
DDR1Q08345 Z98259.2-201ENST00000641583 609 ntBASIC18.83■□□□□ 0.6
DDR1Q08345 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.83■□□□□ 0.6
DDR1Q08345 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.83■□□□□ 0.6
DDR1Q08345 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.83■□□□□ 0.6
DDR1Q08345 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.83■□□□□ 0.6
DDR1Q08345 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDR1Q08345 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 CAP2P1-201ENST00000557743 1390 ntBASIC18.82■□□□□ 0.6
DDR1Q08345 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 AL008718.2-201ENST00000609206 1313 ntBASIC18.82■□□□□ 0.6
DDR1Q08345 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.82■□□□□ 0.6
DDR1Q08345 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.82■□□□□ 0.6
DDR1Q08345 CTBP2P4-201ENST00000513884 920 ntBASIC18.82■□□□□ 0.6
DDR1Q08345 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.82■□□□□ 0.6
DDR1Q08345 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 AC009090.5-201ENST00000624886 2285 ntBASIC18.82■□□□□ 0.6
DDR1Q08345 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.82■□□□□ 0.6
DDR1Q08345 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.82■□□□□ 0.6
DDR1Q08345 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDR1Q08345 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.81■□□□□ 0.6
DDR1Q08345 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 AC136759.1-202ENST00000530858 2194 ntBASIC18.81■□□□□ 0.6
DDR1Q08345 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DDR1Q08345 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
DDR1Q08345 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DDR1Q08345 AC239868.1-201ENST00000369385 493 ntBASIC18.81■□□□□ 0.6
DDR1Q08345 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DDR1Q08345 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDR1Q08345 FAM58BP-201ENST00000439056 645 ntBASIC18.81■□□□□ 0.6
DDR1Q08345 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.81■□□□□ 0.6
DDR1Q08345 RN7SL67P-201ENST00000492147 296 ntBASIC18.81■□□□□ 0.6
DDR1Q08345 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.81■□□□□ 0.6
DDR1Q08345 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms